Hi,
Just trying 4.06 first thing I notice is that when I click one of my connections I'm seeing additional databases,
eg I connect and instead of just seeing db1 and db2 I'm seeing db1,db2,db3 and db4 where db3 and db4 are mysql & test but are empty.
When I try the same thing on my local server I see ALL my databases and not just the one(s) specified in the connection.
HTH